BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031H04SP1|AL429474
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1422 1699 0.0
>3x_Contig1422
Length = 9570
Score = 1699 bits (854), Expect = 0.0
Identities = 862/868 (99%)
Strand = Plus / Plus
Query: 1 atcagtagtcttcawattgtcaagatattctaataaagatggaccagtataccatggaca 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5623 atcagtagtcttcatattgtcaagatattctaataaagatggaccagtataccatggaca 5682
Query: 61 gtccttaggatcgacacgttccttcaaacctgcacctgtgtaaccagacactggcatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5683 gtccttaggatcgacacgttccttcaaacctgcacctgtgtaaccagacactggcatgaa 5742
Query: 121 aatgacgtcctccttaacattgtaacccacasccttcaaaaagtttgtcaagttaccaac 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5743 aatgacgtcctccttaacattgtaacccacagccttcaaaaagtttgtcaagttaccaac 5802
Query: 181 acagtgatcatatctttccttatcccatcccacagttggatcatccatcttgttgataac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5803 acagtgatcatatctttccttatcccatcccacagttggatcatccatcttgttgataac 5862
Query: 241 tacaatcattttgttgacaccttgtgtcttggctaawaaagcgtgctcacgagtttgacc 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5863 tacaatcattttgttgacaccttgtgtcttggctaataaagcgtgctcacgagtttgacc 5922
Query: 301 acccttttcgaaaccagtttcatattcaccctttctagcagaaataaccaaaawaccaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5923 acccttttcgaaaccagtttcatattcaccctttctagcagaaataaccaaaataccaat 5982
Query: 361 atcggcttgagatgcaccaccaatcatttcagaaacatacattttgtgaccgggagcatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5983 atcggcttgagatgcaccaccaatcatttcagaaacatacattttgtgaccgggagcatc 6042
Query: 421 caaaatagtgtaacgactcttttcagtttcaaagtacgctctacccacttcaatggtttt 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6043 caaaatagtgtaacgtctcttttcagtttcaaagtacgctctacccacttcaatggtttt 6102
Query: 481 accgtcgtttctttcttctttgttggtatccatcacccatgataaataccaaccttgtct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6103 accgtcgtttctttcttctttgttggtatccatcacccatgataaataccaaccttgtct 6162
Query: 541 accagcctctttagcctctctctcatatttctcaacggttcttttatccacagaaccagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6163 accagcctctttagcctctctctcatatttctcaacggttcttttatccacagaaccagt 6222
Query: 601 cagatataacaagttaccacccattgttgacttaccagcatcgacgtgacccatgaaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6223 cagatataacaagttaccacccattgttgacttaccagcatcgacgtgacccatgaaaat 6282
Query: 661 gatggaaacatgatccttaccaccaaacatatctttaacgacttcttcgtcaacctcatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6283 gatggaaacatgatccttaccaccaaacatatctttaacgacttcttcgtcaacctcatc 6342
Query: 721 ttcttgttccttgattagagcatccacggagttcgctcctcctgtagatgtgtctgcctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6343 ttcttgttccttgattagagcatccacggagttcgctcctcctgtagatgtgtctgcctt 6402
Query: 781 agcgctggtagtcttctctgaggaagtatcatcagcagatggggtattctccttagtttt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6403 agcgctggtagtcttctctgaggaagtatcatcagcagatggggtattctccttagtttt 6462
Query: 841 tggtttttcagcctctgagawtttcaaa 868
|||||||||||||||||||| |||||||
Sbjct: 6463 tggtttttcagcctctgagattttcaaa 6490
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6517
Number of Sequences: 1807
Number of extensions: 6517
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)